BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030D03LP1|AL429206
(309 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig215 469 e-132
>3x_Contig215
Length = 1068
Score = 469 bits (235), Expect = e-132
Identities = 285/299 (95%), Gaps = 3/299 (1%)
Strand = Plus / Plus
Query: 7 catcgttcgatcctacggtcggacgatggcgtc-ggggagattattattaaatattaata 65
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 catcgttcgatcctacggtcagacgatggcgtccggggagattattattaaatattaata 60
Query: 66 agaaaccccgcggctcctcccccctgtaatccctttaaaggggaggagtccgcggggaaa 125
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 61 agaaaccccgcggctcctccccccggtaatccctttaaaggggaggagtccgcggggaaa 120
Query: 126 gatgtatttacagataaattatttttcaacctttcggttaaatgagttgtatttgtaggg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatgtatttacagataaattatttttcaacctttcggttaaatgagttgtatttgtaggg 180
Query: 186 aatatatatmattccctgcscgactcacccctaggggtgacgcggacntnacatataata 245
||||||||| ||||||||| | |||||||||||||||||| | || | ||||||||||
Sbjct: 181 aatatatataattccctgcaccactcacccctaggggtga-gtgg-tattacatataata 238
Query: 246 ttgggtagtgggaaatgaacccttcatattagtattaatatataataagaataatatat 304
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 239 ttgggtagtgggaaatgaacccttcatattagtattaatatataaaaaaaataatatat 297
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2216
Number of Sequences: 1807
Number of extensions: 2216
Number of successful extensions: 96
Number of sequences better than 1.0e-20: 1
length of query: 309
length of database: 10,358,551
effective HSP length: 15
effective length of query: 294
effective length of database: 10,331,446
effective search space: 3037445124
effective search space used: 3037445124
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 49 (98.2 bits)